Welcome to pyGenomeTracks’s documentation!¶
Standalone program and library to plot beautiful genome browser tracks¶
pyGenomeTracks aims to produce high-quality genome browser tracks that are highly customizable. Currently, it is possible to plot:
bed/gtf (many options)
Here is a scheme which describe how pyGenomeTracks is working (graphical abstract of Lopez-Delisle et al. 2020):
pyGenomeTracks can make plots with or without Hi-C data. The following is an example output of pyGenomeTracks from Ramírez et al. 2017.
There are 3 ways for using pyGenomeTracks: