3.6¶
Enhancements:¶
A new parameter for pyGenomeTracks allow to fix the width of the central part:
--plotWidth
For scale bars, you can now define the position using 2 parameters among
x_center
,size
,scalebar_start_position
andscalebar_end_position
.
Python dependency with conda:¶
Using conda which is the way we recommand installation it is now possible to use Python 3.8.
Relax version control on matplotlib:¶
Any version of matplotlib from 3.1.1 to 3.3.2 is now accepted.
Bugfixes:¶
When the
--fontSize
parameter was used it happened that the colorbar labels were not corresponding to the colorbar ticks. This bug has been fixed.The colormap
pink
was not working because it was both the name of a color and a colormap. This bug has been fixed.When setting
min_value
,max_value
, if the track was empty these values were ignored. This bug has been fixed.When using
operation
in bedgraph with asecond_file
, BEDTools is now used to intersect the second file.use_middle
is now taken into account on the second file.Different handling of string evaluation of color, colormap and operation.